NeuraLib

Packages

  • neuralib package
  • neuralib utility package
    • neuralib.argp
    • neuralib.persistence
    • neuralib.sqlp
    • neuralib.dashboard
    • neuralib.plot
    • neuralib.imglib
    • neuralib.io
      • neuralib.io.core
      • neuralib.io.csv_header
      • neuralib.io.dataset
        • neuralib.io.dataset.google_drive_file
        • neuralib.io.dataset.google_drive_folder
        • neuralib.io.dataset.load_example_rois
        • neuralib.io.dataset.load_example_rois_image
        • neuralib.io.dataset.load_example_dorsal_cortex
        • neuralib.io.dataset.load_ephys_meta
        • neuralib.io.dataset.load_ephys_data
        • neuralib.io.dataset.load_npx2_reconstruction
        • neuralib.io.dataset.load_example_scanbox
        • neuralib.io.dataset.load_example_suite2p
        • neuralib.io.dataset.load_example_rastermap_2p
        • neuralib.io.dataset.load_example_rastermap_wfield
        • neuralib.io.dataset.load_example_dlc_h5
        • neuralib.io.dataset.load_example_dlc_csv
        • neuralib.io.dataset.load_example_facemap_pupil
        • neuralib.io.dataset.load_example_facemap_keypoints
      • neuralib.io.json
      • neuralib.io.output
      • neuralib.io.pyh5
    • neuralib.tools
    • neuralib.typing
    • neuralib.util

Installation

  • Installation

Notebook

  • Example notebook neuralib.argp
  • Example notebook neuralib.imaging (cellular)
  • Example notebook neuralib.model.rastermap (two-photon)
  • Example notebook neuralib.model.rastermap (widefield)
  • Example notebook neuralib.segmentation
  • Example notebook neuralib.atlas
  • Example notebook neuralib.plot

Roadmap

  • Roadmap
NeuraLib
  • neuralib package
  • neuralib.io
  • neuralib.io.dataset
  • View page source

neuralib.io.dataset

google_drive_file

Download file from Google Drive.

google_drive_folder

Download a entire folder from Google Drive.

load_example_rois

load_example_rois_image

load_example_dorsal_cortex

png file from the source svg

load_ephys_meta

load_ephys_data

load_npx2_reconstruction

Example of NeuroPixel2 reconstruction data

load_example_scanbox

load_example_suite2p

load_example_rastermap_2p

load_example_rastermap_wfield

load_example_dlc_h5

load_example_dlc_csv

load_example_facemap_pupil

load_example_facemap_keypoints

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