neuralib.imaging.suite2p

Suite2p

from neuralib.imaging.suite2p import read_suite2p

# Load Suite2p output directory (e.g., .../suite2p/plane0)
result = read_suite2p("/path/to/suite2p/plane0")

# Get shape of fluorescence data
print(result.f_raw.shape)

# Get number of neurons loaded based on threshold
print(result.n_neurons)

# Get GUI options
print(result.ops)

# Retrieve raw ROI coordinates
rois_xy = result.get_rois_pixels()
print("ROI coordinates (pixels):", rois_xy)