neuralib.dashboard.view_brain.BrainView

class neuralib.dashboard.view_brain.BrainView

Bases: AbstractBrainView

__init__()

Methods

__init__()
list_renders([pattern, recursive])	list all renders for those name contain pattern.
plot(fig[, palette])	plot data in figure.
set_visible(visible[, pattern])	Set the visible state of renders for those name contain pattern.
update([x, y])	update the plot

Attributes

brain_image
height
width
data_brain_slice
render_brain_slice

__init__()

property brain_image: ndarray

property height: float | None

list_renders(pattern=None, recursive=False)

list all renders for those name contain pattern.

Parameters:

• pattern (str | None) – str in attribute name

• recursive (bool) – recursive find all renders from ViewComponent attributes.

Returns:

Return type:

list[GlyphRenderer]

plot(fig, palette='Greys256')

plot data in figure.

Parameters:

• fig (figure) – Figure.

• kwargs – plotting parameters.

set_visible(visible, pattern=None)

Set the visible state of renders for those name contain pattern. It is a recursive function that it also update the renders inside the ViewComponent attributes.

Parameters:

• visible (bool)

• pattern (str | None) – str in attribute name

update(x=0, y=0)

update the plot

Parameters:

• x (float)

• y (float)

property width: float | None

data_brain_slice: ColumnDataSource

render_brain_slice: GlyphRenderer