NeuraLib
  • neuralib package
    • neuralib.atlas
    • neuralib.dashboard
    • neuralib.calimg
    • neuralib.imglib
    • neuralib.io
    • neuralib.model
      • neuralib.model.bayes_decoding
      • neuralib.model.rastermap
        • RasterMap
        • neuralib.model.rastermap.core
        • neuralib.model.rastermap.wfield
        • Example usage of 2P dataset in neuralib.model.rastermap
        • Example usage of widefield in neuralib.model.rastermap
      • Example usage of 2P dataset in neuralib.model.rastermap
      • Example usage of widefield in neuralib.model.rastermap
    • neuralib.locomotion
    • neuralib.plot
    • neuralib.signal
    • neuralib.scanner
    • neuralib.segmentation
    • neuralib.morpho
    • neuralib.tools
    • neuralib.typing
    • neuralib.util
    • neuralib.tracking
    • Utilities Modules
  • Example usage of neuralib.calimg
  • Example usage of neuralib.tracking.facemap
  • Example usage of 2P dataset in neuralib.model.rastermap
  • Example usage of widefield in neuralib.model.rastermap
  • Example usage of neuralib.segmentation
  • Example slice view of neuralib.atlas
  • Example brain view of neuralib.atlas.ibl
  • Example usage of neuralib.plot
NeuraLib
  • neuralib package
  • neuralib.model
  • neuralib.model.rastermap
  • View page source

neuralib.model.rastermap

RasterMap

Rastermap is a discovery algorithm for neural data. The algorithm was written by Carsen Stringer and Marius Pachitariu

See also

https://github.com/MouseLand/rastermap

See also

https://colab.research.google.com/github/MouseLand/rastermap/blob/main/notebooks/rastermap_largescale.ipynb

See also

https://colab.research.google.com/github/MouseLand/rastermap/blob/main/notebooks/rastermap_widefield.ipynb

Modules:

  • neuralib.model.rastermap.core
  • neuralib.model.rastermap.wfield

Notebook Demo

  • Example usage of 2P dataset in neuralib.model.rastermap
  • Example usage of widefield in neuralib.model.rastermap
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