Welcome to NeuraLib’s documentation!¶
Utility tools for system neuroscience research, including Open Source Wrapper or Parser
Modules including:
argp
: Use argparse as dataclass fieldatlas
: Whole brain, slice view visualization and rois classificationbokeh_model
: Interactive dashboard visualizationcalimg
: Module for 2photon calcium imaging acquisition and result parsingpersistence
: Module for caching the analyzed results (i.e., concatenation for statistic purpose)plot
: Module for general plotting purposescanner
: Module for parsing Zeiss confocal scanning datasegmentation
: Module for cellular segmentationstimpy
: Tools and Result parser for visual-guided behavior dataset (lab internal use)tools
: other small tools…wrapper
: Module for other open-source tools wrapper, including deeplabcut, facemap, rastermaputil
: …